Caspase

Caspase

Caspase domain
Structure of interleukin-1 beta-converting enzyme.[1]
Identifiers
Symbol Peptidase_C14
Pfam PF00656
Pfam clan CL0093
InterPro IPR002398
PROSITE PS50208
MEROPS C14
SCOP 1ice
SUPERFAMILY 1ice

Caspases (cysteine-aspartic proteases or cysteine-dependent aspartate-directed proteases) are a family of cysteine proteases that play essential roles in apoptosis (programmed cell death), necrosis, and inflammation.[2]

Caspases are essential in cells for apoptosis, or programmed cell death, in development and most other stages of adult life, and have been termed "executioner" proteins for their roles in the cell. Some caspases are also required in the immune system for the maturation of lymphocytes. Failure of apoptosis is one of the main contributions to tumour development and autoimmune diseases; this, coupled with the unwanted apoptosis that occurs with ischemia or Alzheimer's disease, has stimulated interest in caspases as potential therapeutic targets since they were discovered in the mid-1990s.

Contents

  • Types of caspase proteins 1
  • Caspase cascade 2
  • Discovery of caspases, functions 3
  • See also 4
  • References 5
  • External links 6

Types of caspase proteins

As of November 2009, twelve caspases have been identified in humans.[3] There are two types of apoptotic caspases: initiator (apical) caspases and effector (executioner) caspases. Initiator caspases (e.g., CASP2, CASP8, CASP9, and CASP10) cleave inactive pro-forms of effector caspases, thereby activating them. Effector caspases (e.g., CASP3, CASP6, CASP7) in turn cleave other protein substrates within the cell, to trigger the apoptotic process. The initiation of this cascade reaction is regulated by caspase inhibitors.

CASP4 and CASP5, which are overexpressed in some cases of vitiligo and associated autoimmune diseases caused by NALP1 variants,[4] are not currently classified as initiator or effector in MeSH,[5] because they are inflammatory enzymes that, in concert with CASP1, are involved in T-cell maturation.

Caspase cascade

Caspases are regulated at a post-translational level, ensuring that they can be rapidly activated. They are first synthesized as inactive pro-caspases, that consist of a prodomain, a small subunit and a large subunit. Initiator caspases possess a longer prodomain than the effector caspases, whose prodomain is very small. The prodomain of the initiator caspases contain domains such as a CARD domain (e.g., caspases-2 and caspase-9) or a death effector domain (DED) (caspases-8 and caspase-10) that enables the caspases to interact with other molecules that regulate their activation. These molecules respond to stimuli that cause the clustering of the initiator caspases. Such clustering allows them to activate automatically, so that they can proceed to activate the effector caspases. The core interaction of caspases may be regarded as a positive feedback.[6]

The caspase cascade can be activated by:

Overview of signal transduction pathways involved in apoptosis.

Some of the final targets of caspases include:

  • nuclear lamins
  • ICAD/DFF45 (inhibitor of caspase activated DNase or DNA fragmentation factor 45)
  • PARP (poly-ADP ribose polymerase)
  • PAK2 (P 21-activated kinase 2).

The role of caspase substrate cleavage in the morphology of apoptosis is not clear. However, ICAD/DFF45 acts to restrain CAD (caspase-activated DNase). The cleavage and inactivation of ICAD/DFF45 by a caspase allows CAD to enter the nucleus and fragment the DNA, causing the characteristic 'DNA ladder' in apoptotic cells.

In 2009, Queensland researchers announced caspase 1 and 3 in macrophages are regulated by p202 (a double-stranded DNA binding protein) reducing caspase response, and AIM2 (another double-stranded DNA binding protein) increasing caspase activation.[2]

Discovery of caspases, functions

Drosophila melanogaster.

Researchers decided upon the nomenclature of the caspase in 1996. In many instances, a particular caspase had been identified simultaneously by more than one laboratory, who would each give the protein a different name. For example, caspase 3 was variously known as CPP32, apopain and Yama. Caspases, therefore, were numbered in the order in which they were identified.[2] ICE was, therefore, renamed as caspase 1. ICE was the first mammalian caspase to be characterised because of its similarity to the nematode death gene ced-3, but it appears that the principal role of this enzyme is to mediate inflammation rather than cell death.

For the discovery of caspases and other aspects of apoptosis, see articles by Danial and Korsmeyer,[8] Yuan and Horvitz,[9] and by Li et al.[10] in the January 23, 2004 edition of the journal Cell.

Recent studies have demonstrated that caspase proteases are also regulators of non-death functions, the most notable ones being those involving the maturation of a wide variety of cells such as red blood cells and skeletal muscle myoblasts.[11]

See also

References

  1. ^ Wilson KP, Black JA, Thomson JA; et al. (July 1994). "Structure and mechanism of interleukin-1 beta converting enzyme". Nature 370 (6487): 270–5.  
  2. ^ a b  
  3. ^ HUGO Gene Nomenclature Committee
  4. ^ Gregersen, P.K. (22 March 2007). "Modern genetics, ancient defenses, and potential therapies". N Engl J Med. 356 (12): 1263–6.  [PMID 17377166]
  5. ^ NIH Medical Subject Headings
  6. ^ Lopez-Caamal, Fernando; Middleton, Richard H.; Huber, Heinrich (February 2014). "Equilibria and stability of a class of positive feedback loops". Journal of Mathematical Biology: 609–645.  
  7. ^ Yuan, J; et al. (1993). "The C. elegans cell death gene ced-3 encodes a protein similar to mammalian interleukin-1 beta-converting enzyme". Cell 75 (4): 641–652.  
  8. ^ . Danial, N. N.; Korsmeyer, S. J. (January 2004). "Cell Death: Critical Control Points". Cell 116 (2): 205–219.  
  9. ^ Yuan, J.; Horvitz, H. R. (January 2004). "A First Insight into the Molecular Mechanisms of Apoptosis". Cell 116 (2 Suppl): 53–56.  
  10. ^ Li, P.; et al. (January 2004). "Mitochondrial Activation of Apoptosis". Cell 116 (2 Suppl): 57–59.  
  11. ^ Lamkanfi, M.; et al. (January 2007). "Caspases in cell survival, proliferation and differentiation". Cell Death and Differentiation 14 (1): 44–55.  

External links

  • Eukaryotic Linear Motif resource motif class CLV_C14_Caspase3-7
  • Apoptosis Video Demonstrates a model of a caspase cascade as it occurs in vivo.
  • The Mechanisms of Apoptosis Kimball's Biology Pages. Simple explanation of the mechanisms of apoptosis triggered by internal signals (bcl-2), along the caspase-9, caspase-3 and caspase-7 pathway; and by external signals (FAS and TNF), along the caspase 8 pathway. Accessed 25 March 2007.
  • Apoptosis & Caspase 7, PMAP-animation
  • Caspases at the US National Library of Medicine Medical Subject Headings (MeSH)
  • Tumors Beware (from Beaker Blog)